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Ambler class |
Protein name |
PDB code |
Resolution (Å) |
Release date |
UniProt code |
PubMed ID |
DOI |
PDB |
Mutations |
Ligands |
Space group |
Unit cell parameters |
Z value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ▲ ▼ | ▲ ▼ | ▲ ▼ | ▲ ▼ | ▲ ▼ | ▲ ▼ | ||||||||
| C | PDC-1 | 2WZX | 1.40 | 2010-01-12 | P24735 | 20044254 | 10.1016/J.BMCL.2009.12.069 | pdb | *ZX0 CL | P 21 21 21 | 44.759 72.135 105.933 ♦ 90.00 90.00 90.00 | 4 | |
| C | PDC-1 | 2WZZ | 1.57 | 2010-01-12 | P24735 | 20044254 | 10.1016/J.BMCL.2009.12.069 | pdb | *ZX1 CL | P 21 21 21 | 44.791 72.575 106.271 ♦ 90.00 90.00 90.00 | 4 | |
| C | PDC-1 | 3S1Y | 1.40 | 2011-06-29 | P24735 | 21676616 | 10.1016/J.BMCL.2011.05.065 | pdb | R397A | *S1Y CL IPA | P 21 21 21 | 43.253 69.696 101.667 ♦ 90.00 90.00 90.00 | 4 |
| C | PDC-1 | 3S22 | 1.65 | 2011-06-29 | P24735 | 21676616 | 10.1016/J.BMCL.2011.05.065 | pdb | R397A | *3S2 CL | P 21 21 21 | 44.891 71.891 105.889 ♦ 90.00 90.00 90.00 | 4 |
| C | PDC-1 | 4GZB | 1.79 | 2013-04-10 | P24735 | 23439634 | 10.1128/AAC.02247-12 | pdb | EDO | P 32 2 1 | 83.060 83.060 122.420 ♦ 90.00 90.00 120.00 | 6 | |
| C | PDC-1 | 4HEF | 1.86 | 2013-06-05 | P24735 | 23439634 | 10.1128/AAC.02247-12 | pdb | *NXL GOL | P 21 21 21 | 44.880 71.200 106.250 ♦ 90.00 90.00 90.00 | 4 | |
| C | PDC-1 | 4NK3 | 1.90 | 2014-02-19 | P24735 | 24433862 | 10.1016/J.BMCL.2013.12.101 | pdb | R397A | *MK7 | P 21 21 21 | 44.751 72.127 106.039 ♦ 90.00 90.00 90.00 | 4 |
| C | PDC-1 | 4OOY | 1.10 | 2014-08-20 | P24735 | 25022578 | 10.1128/AAC.03057-14 | pdb | *NXL | P 21 21 21 | 44.757 71.269 106.129 ♦ 90.00 90.00 90.00 | 4 | |
| C | PDC-1 | 4WYY | 1.28 | 2015-08-05 | P24735 | 27622821 | 10.1021/ACSINFECDIS.5B00031 | pdb | *3VT DMS GOL | P 21 21 21 | 44.745 70.824 106.230 ♦ 90.00 90.00 90.00 | 4 | |
| C | PDC-1 | 4WZ4 | 1.05 | 2015-08-05 | P24735 | 27622821 | 10.1021/ACSINFECDIS.5B00031 | pdb | *3VU GOL | P 21 21 21 | 44.730 71.270 107.310 ♦ 90.00 90.00 90.00 | 4 | |
| C | PDC-1 | 4X68 | 1.68 | 2015-07-01 | P24735 | 26089439 | 10.1093/JAC/DKV166 | pdb | *OP0 NI | P 1 21 1 | 74.027 54.781 75.667 ♦ 90.00 90.80 90.00 | 4 | |
| C | PDC-1 | 6I30 | 2.21 | 2019-02-20 | A0A2Z4BUZ1 | 30738906 | 10.1016/J.BBAGEN.2019.02.004 | pdb | *C6S | P 21 21 21 | 45.040 75.340 100.620 ♦ 90.00 90.00 90.00 | 4 | |
| C | PDC-1 | 6S1S | 1.78 | 2019-10-09 | Q541D8 | 31574990 | 10.3390/ANTIBIOTICS8040171 | pdb | *KRT PO4 | P 32 2 1 | 82.678 82.678 123.563 ♦ 90.00 90.00 120.00 | 6 | |
| C | PDC-1 | 6UQS | 1.37 | 2019-10-30 | Q541D8 | 31759850 | 10.1016/j.bmcl.2019.126795 | pdb | R397A | *QFP CL | P 21 21 21 | 44.744 72.168 105.218 ♦ 90.00 90.00 90.00 | 4 |
| C | PDC-1 | 6UQT | 1.25 | 2019-10-30 | Q541D8 | 31759850 | 10.1016/j.bmcl.2019.126795 | pdb | R397A | *QFS CL | P 21 21 21 | 44.773 71.398 105.073 ♦ 90.00 90.00 90.00 | 4 |
| C | PDC-1 | 6UQU | 1.09 | 2019-10-30 | Q541D8 | 31759850 | 10.1016/j.bmcl.2019.126795 | pdb | R397A | *PBC CL | P 21 21 21 | 44.993 71.912 105.129 ♦ 90.00 90.00 90.00 | 4 |
| C | PDC-1 | 6UR3 | 1.42 | 2019-10-30 | Q541D8 | 31759850 | 10.1016/j.bmcl.2019.126795 | pdb | R397A | *QFP CL EDO | P 21 21 21 | 44.731 71.460 104.763 ♦ 90.00 90.00 90.00 | 4 |
Statistics (number of structures): Overall (1663); class A (626); subclass B1 (403); subclass B2 (16); subclass B3 (104); class C (246); class D (268).
Last updated: July 23, 2024.
If you use BLDB please cite: Naas, T.; Oueslati, S.; Bonnin, R. A.; Dabos, M. L.; Zavala, A.; Dortet, L.; Retailleau, P.; Iorga, B. I., Beta-Lactamase DataBase (BLDB) – Structure and Function. J. Enzyme Inhib. Med. Chem. 2017, 32, 917-919.
The development of the BLDB database was funded in part by the JPIAMR transnational project DesInMBL, the Région Ile-de-France (DIM Malinf) and the Laboratory of Excellence in Research on Medication and Innovative Therapeutics (LERMIT).
Contact: contact@bldb.eu