Beta-Lactamase DataBase
Beta-Lactamase DataBase - Structure and Function Home Enzymes Structures Mutants Kinetics BLAST
Beta-Lactamase DataBase

Structures

Ambler
class
Protein
name
PDB
code
Resolution
(Å)
Release
date
UniProt
code
PubMed
ID
DOI
PDB
Mutations
Ligands
Space
group
Unit cell parameters
Z
value
DOXA-101E3U1.662001-01-12P14489 1118869310.1016/S0969-2126(00)00534-7pdb AUC EDO SO4 P 1 21 165.530 82.940 101.420 ♦ 90.00 95.03 90.006
DOXA-101E4D1.802001-01-12P14489 1118869310.1016/S0969-2126(00)00534-7pdb EDO KCX SO4 P 1 21 167.279 82.436 101.165 ♦ 90.00 95.89 90.008
DOXA-101EWZ2.402000-11-01P14489 10.1021/JA0013881pdb P 1 21 166.415 82.395 101.488 ♦ 90.00 95.40 90.008
DOXA-101FOF2.002000-10-09P14489 1101720310.1038/79688pdb CO SO4 P 21 21 2148.400 96.200 125.700 ♦ 90.00 90.00 90.008
DOXA-101K4E2.002001-10-31P14489 pdb KCX MSE SO4 P 21 21 2148.562 102.273 126.349 ♦ 90.00 90.00 90.008
DOXA-101K4F1.602001-10-31P14489 pdb KCX SO4 P 21 21 2148.478 94.365 125.705 ♦ 90.00 90.00 90.008
DOXA-101K541.702001-11-07P14489 1172492310.1073/PNAS.241442898pdb *HOQ EDO KCX SO4 P 1 21 166.649 82.480 101.957 ♦ 90.00 95.38 90.004
DOXA-101K551.392001-11-07P14489 1172492310.1073/PNAS.241442898pdb EDO KCX SO4 P 1 21 166.514 82.285 101.713 ♦ 90.00 95.44 90.008
DOXA-101K561.702001-11-07P14489 1172492310.1073/PNAS.241442898pdb KCX SO4 P 1 21 166.652 82.430 101.715 ♦ 90.00 95.49 90.006
DOXA-101K571.902001-11-07P14489 1172492310.1073/PNAS.241442898pdb KCX SO4 P 1 21 166.755 82.520 101.791 ♦ 90.00 95.50 90.004
DOXA-101K6R2.302003-06-24P14489 pdb *MX1 P 21 21 2148.706 96.003 125.195 ♦ 90.00 90.00 90.008
DOXA-101K6S2.032003-06-24P14489 pdb *IAP CA KCX SO4 P 21 21 2148.245 95.787 125.074 ♦ 90.00 90.00 90.008
DOXA-102HP52.702007-07-03P14489 1986047110.1021/BI901548CpdbW154G CO SO4 P 1 21 147.110 125.400 92.360 ♦ 90.00 99.80 90.008
DOXA-102HP62.202007-07-03P14489 1986047110.1021/BI901548CpdbW154A SO4 P 21 21 2148.600 96.720 125.550 ♦ 90.00 90.00 90.008
DOXA-102HP92.502007-07-03P14489 1986047110.1021/BI901548CpdbW154A SO4 P 21 21 2148.330 94.430 125.290 ♦ 90.00 90.00 90.008
DOXA-102HPB2.052007-07-03P14489 1986047110.1021/BI901548CpdbW154A SO4 P 21 21 2148.450 95.460 125.670 ♦ 90.00 90.00 90.008
DOXA-102RL31.902008-10-28P14489 1986047110.1021/BI901548CpdbW154H EDO GOL KCX SO4 P 21 21 2148.680 97.060 125.680 ♦ 90.00 90.00 90.008
DOXA-102WGI2.852009-11-10P14489 1986047110.1021/BI901548CpdbW154A *PNM GOL P 21 21 2148.800 93.100 127.700 ♦ 90.00 90.00 90.008
DOXA-102WGV1.802010-05-19P14489 2110860510.1042/BJ20101122pdbV117T CIT CL GOL SO4 P 21 21 2148.750 101.700 126.600 ♦ 90.00 90.00 90.008
DOXA-102WGW1.802010-05-19P14489 2110860510.1042/BJ20101122pdbV117T GOL KCX SO4 P 21 21 2148.650 96.620 126.020 ♦ 90.00 90.00 90.008
DOXA-102WKH1.792010-08-25P14489 2110860510.1042/BJ20101122pdbK70C *ZZ7 SO4 P 21 21 2148.920 97.090 126.130 ♦ 90.00 90.00 90.008
DOXA-102WKI2.102010-08-25P14489 2110860510.1042/BJ20101122pdbK70C EDO GOL SO4 P 21 21 2148.460 96.300 125.950 ♦ 90.00 90.00 90.008
DOXA-102X011.902010-12-08P14489 pdbS67A DMS KCX PG4 SO4 P 21 21 2148.376 95.071 125.562 ♦ 90.00 90.00 90.008
DOXA-102X021.352010-12-08P14489 pdb DMS GOL KCX PG4 SO4 P 21 21 2148.550 96.850 125.740 ♦ 90.00 90.00 90.008
DOXA-103LCE2.002010-03-09P14489 2014113210.1021/JA9086374pdb *LCE GOL KCX PO4 P 1 21 165.700 82.544 102.360 ♦ 90.00 94.63 90.008
DOXA-103QNB1.952011-11-02Q7BNC2 2204284410.1073/PNAS.1110530108pdb EDO KCX SO4 P 3281.330 81.330 151.921 ♦ 90.00 90.00 120.0012
DOXA-103QNC1.602011-11-02Q7BNC2 2204284410.1073/PNAS.1110530108pdb CO2 EDO KCX SO4 P 21 21 2149.210 97.010 125.870 ♦ 90.00 90.00 90.008
DOXA-104S2O1.702015-02-25P14489 2762253010.1021/ACSINFECDIS.5B00007pdb *NXL CO P 21 21 2148.600 96.500 125.700 ♦ 90.00 90.00 90.008
DOXA-104WZ51.602015-08-05P14489 2762282110.1021/ACSINFECDIS.5B00031pdb *3VU CO2 KCX SO4 P 1 21 165.740 82.350 102.380 ♦ 90.00 94.54 90.004
DOXA-105FQ91.502016-08-17P14489 2749942410.1038/NCOMMS12406pdb *C6S ACT CL GOL KCX NA P 21 21 2148.898 103.109 125.529 ♦ 90.00 90.00 90.002
DOXA-105MMY1.882017-07-12P14489 2867829510.1039/C7OB01514Cpdb CL CO3 DMS EDO EPE GOL KCX P 21 21 2148.772 102.189 127.409 ♦ 90.00 90.00 90.008
DOXA-105MNU1.562017-07-12P14489 2867829510.1039/C7OB01514Cpdb *NXL BR GOL NA P 21 21 2148.771 101.421 127.221 ♦ 90.00 90.00 90.008
DOXA-105MOX1.412017-07-12P14489 2867829510.1039/C7OB01514Cpdb *NXL CO2 GOL NA P 21 21 2148.751 96.635 126.363 ♦ 90.00 90.00 90.008
DOXA-105MOZ1.342017-07-12P14489 2867829510.1039/C7OB01514Cpdb *NXL CL GOL IOD NA P 21 21 2148.841 101.658 126.727 ♦ 90.00 90.00 90.008
DOXA-106RTN2.172019-09-11P14489 3145423110.1021/ACS.JMEDCHEM.9B00911pdb *KJK CL KCX P 21 21 2148.879 95.620 126.269 ♦ 90.00 90.00 90.008
DOXA-106SKP1.892019-09-18Q7BNC2 3268379410.1002/2211-5463.12935pdb *IM2 KCX NA PGE P 21 21 2194.933 124.794 48.480 ♦ 90.00 90.00 90.008
DOXA-106SKR1.852019-09-18Q7BNC2 3268379410.1002/2211-5463.12935pdb *1RG FMT KCX MG P 21 21 2148.388 94.776 125.588 ♦ 90.00 90.00 90.008
DOXA-106ZRG1.742021-07-21Q7BNC2 pdbA217G N213E E211R G215K F208Y S212I V216I $QP2 CL EDO KCX SO4 P 21 21 2149.563 93.674 126.381 ♦ 90.00 90.00 90.008
DOXA-106ZRH1.882021-07-21Q7BNC2 pdbA217G N213T G215Q F208W T212V V210M *2RG EDO KCX P 3280.930 80.930 152.150 ♦ 90.00 90.00 120.0012
DOXA-106ZRI1.602021-07-21Q7BNC2 pdbA217G N213T G215Q F208W T212V V210M *DWZ EDO KCX P 3280.640 80.640 152.290 ♦ 90.00 90.00 120.0012
DOXA-106ZW21.752021-08-11Q7BNC2 pdbA217G N213E E211R G215K F208Y S212I V216I $8YL CL EDO KCX SO4 P 21 21 2149.715 93.744 126.359 ♦ 90.00 90.00 90.008
DOXA-107B3R1.832022-01-12P14489 pdb DHA KCX NA P 21 21 2148.610 95.457 126.186 ♦ 90.00 90.00 90.004
DOXA-107B3S1.852022-01-12P14489 pdb CO2 DHA KCX NA SO4 P 21 21 2148.896 97.205 125.898 ♦ 90.00 90.00 90.008
DOXA-107B3U1.602022-01-12P14489 pdb NA PEG SO4 SWW P 21 21 2148.935 97.222 125.988 ♦ 90.00 90.00 90.008
Legend for ligands: * Ligand covalently-bound to active site residues; $ Non-covalent ligand (Michaelis complex); # Ligand coordinated to active site metal ions.

Statistics (number of structures): Overall (1663); class A (626); subclass B1 (403); subclass B2 (16); subclass B3 (104); class C (246); class D (268).

Last updated: November 20, 2024.

If you use BLDB please cite: Naas, T.; Oueslati, S.; Bonnin, R. A.; Dabos, M. L.; Zavala, A.; Dortet, L.; Retailleau, P.; Iorga, B. I., Beta-Lactamase DataBase (BLDB) – Structure and Function. J. Enzyme Inhib. Med. Chem. 2017, 32, 917-919.

The development of the BLDB database was funded in part by the JPIAMR transnational project DesInMBL, the Région Ile-de-France (DIM Malinf) and the Laboratory of Excellence in Research on Medication and Innovative Therapeutics (LERMIT).

Contact: contact@bldb.eu

Live statistics (since December 3rd, 2023)