Beta-Lactamase DataBase
Beta-Lactamase DataBase - Structure and Function Home Enzymes Structures Mutants Kinetics BLAST
Beta-Lactamase DataBase

Structures

Ambler
class
Protein
name
PDB
code
Resolution
(Å)
Release
date
UniProt
code
PubMed
ID
DOI
PDB
Mutations
Ligands
Space
group
Unit cell parameters
Z
value
CEC-11C3B2.2524/11/1999P00811 10595535pdb *BZB C 1 2 1118.859 78.012 98.962 ♦ 90.00 116.07 90.008
CEC-11FCM2.4604/12/2000P00811 10.1021/JA001676XpdbY147E Q117L *CXU C 1 2 1118.520 76.190 98.280 ♦ 90.00 116.68 90.008
CEC-11FCN2.3504/12/2000P00811 10.1021/JA001676XpdbY147E Q117L *LOR C 1 2 1119.360 76.264 98.355 ♦ 90.00 116.00 90.008
CEC-11FCO2.2004/12/2000P00811 10.1021/JA001676Xpdb *MOX C 1 2 1118.116 77.166 97.923 ♦ 90.00 116.17 90.008
CEC-11FSW1.9014/03/2001P00811 1118231610.1016/S1074-5521(00)00052-1pdb *CTB PO4 C 1 2 1118.110 77.829 97.318 ♦ 90.00 115.83 90.008
CEC-11FSY1.7514/03/2001P00811 1118231610.1016/S1074-5521(00)00052-1pdb *105 PO4 C 1 2 1118.360 77.570 97.460 ♦ 90.00 116.18 90.008
CEC-11GA92.1025/07/2001P00811 1141037810.1016/S1074-5521(01)00034-5pdb *ETP K PO4 C 1 2 1118.990 78.060 97.790 ♦ 90.00 115.53 90.008
CEC-11I5Q1.8320/06/2001P00811 1143476810.1021/BI010641MpdbN152A *MOX C 1 2 1117.661 77.267 97.677 ♦ 90.00 116.75 90.008
CEC-11IEL2.0015/08/2001P00811 1147888810.1021/BI0109358pdb *CAZ PO4 C 1 2 1118.490 77.040 98.070 ♦ 90.00 115.76 90.008
CEC-11IEM2.3015/08/2001P00811 1147888810.1021/BI0109358pdb *CB4 PO4 C 1 2 1118.560 78.060 97.240 ♦ 90.00 115.44 90.008
CEC-11KDS2.1517/07/2002P00811 1210990610.1021/JM020002Ppdb *NPB C 1 2 1119.108 77.730 99.010 ♦ 90.00 115.86 90.008
CEC-11KDW2.2817/07/2002P00811 1210990610.1021/JM020002Ppdb *4CB PO4 C 1 2 1118.550 77.380 97.330 ♦ 90.00 115.30 90.008
CEC-11KE02.3017/07/2002P00811 1210990610.1021/JM020002Ppdb *CVB PO4 C 1 2 1118.620 77.430 97.370 ♦ 90.00 115.32 90.008
CEC-11KE32.1517/07/2002P00811 1210990610.1021/JM020002Ppdb *BDB PO4 C 1 2 1117.800 78.360 97.380 ♦ 90.00 115.93 90.008
CEC-11KE41.7217/07/2002P00811 1210990610.1021/JM020002Ppdb PO4 C 1 2 1118.490 76.970 97.670 ♦ 90.00 115.90 90.008
CEC-11KVL1.5313/03/2002P00811 1200543910.1016/S0969-2126(02)00725-6pdbS64G $CLS $THN *KCP PO4 C 1 2 1118.619 77.153 98.066 ♦ 90.00 115.90 90.008
CEC-11KVM2.0613/03/2002P00811 1200543910.1016/S0969-2126(02)00725-6pdb *CEO PO4 C 1 2 1117.690 77.200 97.590 ♦ 90.00 116.13 90.008
CEC-11L0D1.5314/08/2002P00811 1214478510.1016/S0022-2836(02)00599-5pdbS64D PO4 C 1 2 1118.672 76.504 97.722 ♦ 90.00 115.65 90.008
CEC-11L0E1.9014/08/2002P00811 1214478510.1016/S0022-2836(02)00599-5pdbK67Q PO4 C 1 2 1119.022 76.077 98.094 ♦ 90.00 115.84 90.008
CEC-11L0F1.6614/08/2002P00811 1214478510.1016/S0022-2836(02)00599-5pdbN152H PO4 C 1 2 1118.936 76.260 97.922 ♦ 90.00 115.69 90.008
CEC-11L0G1.5014/08/2002P00811 1214478510.1016/S0022-2836(02)00599-5pdbS64G PO4 SUC C 1 2 1118.387 76.329 97.665 ♦ 90.00 115.76 90.008
CEC-11L2S1.9417/07/2002P00811 1212165610.1016/S0969-2126(02)00799-2pdb $STC C 1 2 1118.670 76.420 97.900 ♦ 90.00 116.63 90.008
CEC-11LL51.8027/11/2002P00811 1243570410.1128/AAC.46.12.3978-3980.2002pdb *IM2 C 1 2 1118.457 76.911 98.009 ♦ 90.00 116.16 90.008
CEC-11LL91.8702/10/2002P00811 1232337110.1016/S1074-5521(02)00211-9pdb *AXL C 1 2 1118.330 76.849 97.993 ♦ 90.00 116.51 90.008
CEC-11LLB1.7202/10/2002P00811 1232337110.1016/S1074-5521(02)00211-9pdb *PCN C 1 2 1118.663 76.734 98.169 ♦ 90.00 116.19 90.008
CEC-11MXO1.8304/03/2003P00811 1252666810.1021/JA0288338pdb *SM2 PO4 C 1 2 1117.957 77.488 96.906 ♦ 90.00 115.78 90.008
CEC-11MY81.7204/03/2003P00811 1252666810.1021/JA0288338pdb *SM3 PO4 C 1 2 1118.205 76.699 97.656 ♦ 90.00 116.31 90.008
CEC-11O071.7126/08/2003P00811 1290402710.1021/JA034861UpdbY150E Q120L K MXG C 1 2 1118.808 76.298 98.127 ♦ 90.00 116.21 90.008
CEC-11PI41.3924/02/2004P00811 1466196010.1021/BI035054ApdbN289A *SM3 K PO4 C 1 2 1118.628 76.104 97.836 ♦ 90.00 115.61 90.008
CEC-11PI51.4924/02/2004P00811 1466196010.1021/BI035054ApdbN289A *SM2 K PO4 C 1 2 1119.050 76.008 97.595 ♦ 90.00 115.54 90.008
CEC-11XGI1.9603/05/2005P00811 1579652810.1021/JA042984Opdb $NST C 1 2 1118.469 76.279 97.674 ♦ 90.00 116.37 90.008
CEC-11XGJ1.9703/05/2005P00811 1579652810.1021/JA04pdb $HTC C 1 2 1117.750 76.770 97.900 ♦ 90.00 116.63 90.008
CEC-12BLS2.0012/08/1998P00811 981920110.1021/BI981210Fpdb C 1 2 1117.730 77.350 97.590 ♦ 90.00 116.45 90.008
CEC-12FFY1.0728/03/2006P00811 1650677710.1021/JA056806MpdbN289A *SM3 K PO4 C 1 2 1118.840 76.063 97.898 ♦ 90.00 115.85 90.008
CEC-12HDQ2.1007/11/2006P00811 1707230410.1038/NCHEMBIO831pdb $C21 C 1 2 1119.434 74.781 98.281 ♦ 90.00 116.14 90.008
CEC-12HDR2.2007/11/2006P00811 1707230410.1038/NCHEMBIO831pdb $4A3 PO4 C 1 2 1117.239 77.340 99.010 ♦ 90.00 118.44 90.008
CEC-12HDS1.1607/11/2006P00811 1707230410.1038/NCHEMBIO831pdb $4MB NA PO4 SUC C 1 2 1119.238 74.764 98.050 ♦ 90.00 115.98 90.008
CEC-12HDU1.4907/11/2006P00811 1707230410.1038/NCHEMBIO831pdb $F12 K PO4 C 1 2 1117.905 77.057 97.520 ♦ 90.00 116.86 90.008
CEC-12I722.2011/09/2007P00811 1795608110.1021/JM070643Qpdb *VA1 C 1 2 1117.632 77.236 97.825 ♦ 90.00 116.73 90.008
CEC-12P9V1.8014/08/2007P00811 1762806310.1021/JA072370Updb *KCX PO4 C 1 2 1119.020 76.434 97.786 ♦ 90.00 116.07 90.004
CEC-12PU21.8615/04/2008P00811 1833360810.1021/JM701500Epdb $DK2 PO4 C 1 2 1118.721 76.842 97.495 ♦ 90.00 115.80 90.008
CEC-12PU42.0015/04/2008P00811 1833360810.1021/JM701500Epdb *OX6 *OX7 DMS SO4 P 21 21 2110.389 91.104 82.534 ♦ 90.00 90.00 90.008
CEC-12R9W1.8015/04/2008P00811 1833360810.1021/JM701500Epdb $23C PO4 C 1 2 1118.683 77.255 97.939 ♦ 90.00 116.53 90.008
CEC-12R9X1.9015/04/2008P00811 1833360810.1021/JM701500Epdb $WH6 DMS PO4 C 1 2 1118.857 76.737 97.671 ♦ 90.00 116.56 90.008
CEC-12RCX2.0027/11/2007P00811 1799731810.1016/J.BMC.2007.10.075pdb *SM4 PO4 C 1 2 1118.378 76.937 97.254 ♦ 90.00 115.87 90.008
CEC-13BLS2.3012/08/1998P00811 981920110.1021/BI981210Fpdb *APB C 1 2 1119.380 78.970 99.300 ♦ 90.00 116.30 90.008
CEC-13BM62.1017/02/2009P00811 2045220810.1016/J.BMCL.2010.04.007pdb *C9P C 1 2 1118.908 77.180 97.937 ♦ 90.00 115.98 90.008
CEC-13FKV1.8524/03/2009P00811 1924137610.1002/PRO.60pdbK67R *BZB K PO4 C 1 2 1118.043 76.949 97.831 ♦ 90.00 116.23 90.008
CEC-13FKW1.5024/03/2009P00811 1924137610.1002/PRO.60pdbK67R K PO4 C 1 2 1118.348 76.564 97.702 ♦ 90.00 115.82 90.008
CEC-13GQZ1.8014/04/2009P00811 1941692010.1073/PNAS.0813029106pdb $GF7 DMS C 1 2 1119.346 74.655 98.948 ♦ 90.00 116.58 90.008
CEC-13GR21.8014/04/2009P00811 1941692010.1073/PNAS.0813029106pdb $GF4 C 1 2 1118.525 76.547 98.009 ♦ 90.00 116.36 90.008
CEC-13GRJ2.4914/04/2009P00811 1941692010.1073/PNAS.0813029106pdb $G14 DMS PEG PO4 C 1 2 1117.508 76.811 98.005 ♦ 90.00 116.66 90.008
CEC-13GSG2.1014/04/2009P00811 1941692010.1073/PNAS.0813029106pdb $GF1 DMS PO4 C 1 2 1118.594 75.930 97.659 ♦ 90.00 116.37 90.008
CEC-13GTC1.9014/04/2009P00811 1941692010.1073/PNAS.0813029106pdb $GTC PO4 C 1 2 1118.447 77.951 97.881 ♦ 90.00 115.76 90.008
CEC-13GV91.8014/04/2009P00811 1941692010.1073/PNAS.0813029106pdb $GV9 DMS PEG PO4 C 1 2 1118.166 78.329 97.711 ♦ 90.00 116.59 90.008
CEC-13GVB1.8014/04/2009P00811 1941692010.1073/PNAS.0813029106pdb $3GV DMS PO4 C 1 2 1118.109 76.177 97.522 ♦ 90.00 116.51 90.008
CEC-13IWI1.6416/02/2010P00811 1991303410.1016/J.JMB.2009.11.005pdb PO4 C 1 2 1117.582 77.926 98.050 ♦ 90.00 115.96 90.008
CEC-13IWO1.9016/02/2010P00811 1991303410.1016/J.JMB.2009.11.005pdbY221G PO4 SUC C 1 2 1117.717 76.789 98.693 ♦ 90.00 116.62 90.008
CEC-13IWQ1.8416/02/2010P00811 1991303410.1016/J.JMB.2009.11.005pdbE219K PO4 C 1 2 1118.221 76.898 116.549 ♦ 90.00 130.87 90.008
CEC-13IXB1.6316/02/2010P00811 1991303410.1016/J.JMB.2009.11.005pdbE219K *BZB PO4 C 1 2 1117.061 77.412 97.235 ♦ 90.00 115.58 90.008
CEC-13IXD2.6416/02/2010P00811 1991303410.1016/J.JMB.2009.11.005pdbV298E SO4 P 1 21 181.271 75.852 84.086 ♦ 90.00 100.25 90.004
CEC-13IXG2.1416/02/2010P00811 1991303410.1016/J.JMB.2009.11.005pdbT70I *BZB C 1 2 1114.162 77.361 91.747 ♦ 90.00 122.12 90.008
CEC-13IXH2.3016/02/2010P00811 1991303410.1016/J.JMB.2009.11.005pdbY221G *PCZ C 1 2 1117.803 77.583 98.887 ♦ 90.00 118.60 90.008
CEC-13O861.6003/11/2010P00811 2094590510.1021/JM101015Zpdb *BSF PO4 C 1 2 1118.340 76.880 97.760 ♦ 90.00 116.11 90.008
CEC-13O871.7803/11/2010P00811 2094590510.1021/JM101015Zpdb *BSG PO4 C 1 2 1118.130 76.190 97.380 ♦ 90.00 116.16 90.008
CEC-13O881.6403/11/2010P00811 2094590510.1021/JM101015Zpdb *BSH PO4 C 1 2 1118.030 77.390 97.410 ♦ 90.00 115.89 90.008
CEC-14E3I1.6026/09/2012P00811 2304311710.1073/PNAS.1208337109pdb *0N3 PO4 C 1 2 1118.460 77.140 97.750 ♦ 90.00 116.67 90.008
CEC-14E3J1.8026/09/2012P00811 2304311710.1073/PNAS.1208337109pdb *0N4 PO4 C 1 2 1118.440 76.540 97.740 ♦ 90.00 116.88 90.008
CEC-14E3K1.4326/09/2012P00811 2304311710.1073/PNAS.1208337109pdb *0NA PO4 C 1 2 1119.120 76.820 97.830 ♦ 90.00 116.25 90.008
CEC-14E3L1.4326/09/2012P00811 2304311710.1073/PNAS.1208337109pdb *0NB PO4 C 1 2 1117.650 77.220 97.690 ♦ 90.00 116.42 90.008
CEC-14E3M1.4426/09/2012P00811 2304311710.1073/PNAS.1208337109pdb *0ND PO4 C 1 2 1118.120 76.920 97.600 ♦ 90.00 116.37 90.008
CEC-14E3N1.4926/09/2012P00811 2304311710.1073/PNAS.1208337109pdb *0NE PO4 C 1 2 1118.160 76.730 97.900 ♦ 90.00 116.58 90.008
CEC-14E3O1.6026/09/2012P00811 2304311710.1073/PNAS.1208337109pdb *0NG PO4 C 1 2 1118.540 76.740 97.880 ♦ 90.00 116.60 90.008
CEC-14JXG1.6529/10/2014P00811 pdb *1S6 PO4 SUC C 1 2 1117.856 76.868 97.845 ♦ 90.00 117.01 90.008
CEC-14JXS1.9007/05/2014P00811 2483578510.1016/J.BMC.2014.04.051pdb $18U PO4 C 1 2 1118.430 76.711 97.559 ♦ 90.00 115.61 90.008
CEC-14JXV1.7630/04/2014P00811 2483578510.1016/J.BMC.2014.04.051pdb $1MU PO4 C 1 2 1118.656 77.162 97.651 ♦ 90.00 115.36 90.008
CEC-14JXW2.3007/05/2014P00811 2483578510.1016/J.BMC.2014.04.051pdb $1MW PO4 C 1 2 1118.914 77.736 98.354 ♦ 90.00 115.36 90.008
CEC-14KEN1.8929/10/2014P00811 pdbN152G *1S7 PO4 C 1 2 1111.192 81.488 47.386 ♦ 90.00 105.30 90.004
CEC-14KG21.8929/10/2014P00811 pdb *PCZ PO4 C 1 2 1117.836 78.751 98.095 ♦ 90.00 115.40 90.008
CEC-14KG52.1129/10/2014P00811 pdbN152G *PCZ PO4 C 1 2 1163.367 80.348 129.790 ♦ 90.00 103.99 90.0016
CEC-14KG61.7529/10/2014P00811 pdbN152G PO4 C 1 2 1163.773 79.660 129.288 ♦ 90.00 104.01 90.0016
CEC-14KZ31.6721/05/2014P00811 2480770410.1021/CB5001636pdb $1U1 PO4 C 1 2 1117.990 77.360 97.730 ♦ 90.00 116.19 90.008
CEC-14KZ41.4221/05/2014P00811 2480770410.1021/CB5001636pdb $4A1 PO4 C 1 2 1118.570 76.630 98.100 ♦ 90.00 116.16 90.008
CEC-14KZ51.3521/05/2014P00811 2480770410.1021/CB5001636pdb $1U3 PO4 C 1 2 1118.080 76.860 97.710 ♦ 90.00 116.26 90.008
CEC-14KZ61.6821/05/2014P00811 2480770410.1021/CB5001636pdb $ZB6 PO4 C 1 2 1118.090 77.080 97.540 ♦ 90.00 116.36 90.008
CEC-14KZ71.4321/05/2014P00811 2480770410.1021/CB5001636pdb $1U5 PO4 C 1 2 1119.340 77.610 97.700 ♦ 90.00 116.05 90.008
CEC-14KZ82.2821/05/2014P00811 2480770410.1021/CB5001636pdb $1U6 PO4 C 1 2 1117.610 77.800 98.690 ♦ 90.00 116.59 90.008
CEC-14KZ91.7221/05/2014P00811 2480770410.1021/CB5001636pdb $1U7 PO4 C 1 2 1118.580 76.420 97.500 ♦ 90.00 115.70 90.008
CEC-14KZA1.6021/05/2014P00811 2480770410.1021/CB5001636pdb $NZ9 PO4 C 1 2 1118.620 76.630 97.980 ♦ 90.00 116.91 90.008
CEC-14KZB1.3721/05/2014P00811 2480770410.1021/CB5001636pdb $NZ2 NZ3 C 1 2 1117.600 77.440 97.500 ♦ 90.00 116.18 90.008
CEC-14LV01.6530/07/2014P00811 2534481510.1038/nchembio.1666pdb *APB PO4 C 1 2 1118.460 77.460 97.510 ♦ 90.00 116.04 90.008
CEC-14LV11.7430/07/2014P00811 2534481510.1038/nchembio.1666pdb *NL9 PO4 C 1 2 1118.580 77.540 97.640 ♦ 90.00 116.46 90.008
CEC-14LV21.6530/07/2014P00811 2534481510.1038/nchembio.1666pdb *N95 PO4 C 1 2 1117.670 78.140 97.250 ♦ 90.00 116.28 90.008
CEC-14LV31.4230/07/2014P00811 2534481510.1038/nchembio.1666pdb *25N PO4 C 1 2 1118.550 76.790 98.080 ♦ 90.00 115.72 90.008
CEC-14OKP1.3728/05/2014P00811 2479193110.1021/JA501354Qpdb $2V0 PO4 C 1 2 1118.120 76.490 97.620 ♦ 90.00 115.85 90.008
CEC-14OLD1.4828/05/2014P00811 2479193110.1021/JA501354Qpdb $2UZ PO4 C 1 2 1118.450 76.420 97.880 ♦ 90.00 115.95 90.008
CEC-14OLG1.7128/05/2014P00811 2479193110.1021/JA501354Qpdb *2TV PO4 C 1 2 1118.660 77.150 98.140 ♦ 90.00 115.95 90.008
CEC-16DPT1.7904/07/2018P00811 3072850210.1038/s41586-019-0917-9pdb $H7M I 1 2 198.166 77.557 115.510 ♦ 90.00 113.04 90.008
CEC-16DPX1.9004/07/2018P00811 3072850210.1038/s41586-019-0917-9pdb $H7G I 1 2 198.018 77.697 115.945 ♦ 90.00 113.34 90.008
CEC-16DPY1.9104/07/2018P00811 3072850210.1038/s41586-019-0917-9pdb $H7A I 1 2 197.436 77.562 115.670 ♦ 90.00 113.13 90.008
CEC-16DPZ1.5004/07/2018P00811 3072850210.1038/s41586-019-0917-9pdb $H7D I 1 2 197.702 77.737 115.686 ♦ 90.00 113.25 90.008
CEC-16T351.752020-11-18P00811 pdb *M9W CL PEG SO4 ZN P 43 3 2138.000 138.000 138.000 ♦ 90.00 90.00 90.0024
CEC-16T3D1.5024/06/2020P00811 3254568210.3390/BIOM10060899pdb CL EDO SO4 ZN P 43 3 2139.180 139.180 139.180 ♦ 90.00 90.00 90.0024
CEC-16T5Y1.302020-11-18P00811 3319939110.1128/AAC.02073-20pdb *C8V CL PEG ZN P 43 3 2137.760 137.760 137.760 ♦ 90.00 90.00 90.0024
CEC-16T7L1.472020-11-18P00811 3319939110.1128/AAC.02073-20pdb *OP0 CL MES PGE SO4 ZN P 43 3 2138.178 138.178 138.178 ♦ 90.00 90.00 90.0024
CEC-16TBW1.512020-11-18P00811 3319939110.1128/AAC.02073-20pdb *NXL CL PGE ZN P 43 3 2138.083 138.083 138.083 ♦ 90.00 90.00 90.0024
CEC-16TPM1.722020-11-25P00811 3319939110.1128/AAC.02073-20pdb *MK7 CL MES PEG SO4 ZN P 43 3 2138.500 138.500 138.500 ♦ 90.00 90.00 90.0024
CEC-16YEN1.4224/06/2020P00811 3254568210.3390/BIOM10060899pdb *KJK CL EDO K9K MES NA PEG ZN P 43 3 2137.229 137.229 137.229 ♦ 90.00 90.00 90.0024
CEC-16YEO2.0424/06/2020P00811 3254568210.3390/BIOM10060899pdb *OK3 CL EPE GOL MPD NA P 2 2 21100.683 179.590 99.658 ♦ 90.00 90.00 90.0016
CEC-16YPD1.6024/06/2020P00811 3254568210.3390/BIOM10060899pdb *KL8 CL DMS EDO PEG ZN P 43 3 2138.971 138.971 138.971 ♦ 90.00 90.00 90.0024
Legend for ligands: * Ligand covalently-bound to active site residues; $ Non-covalent ligand (Michaelis complex); # Ligand coordinated to active site metal ions.

Statistics (number of structures): Overall (1663); class A (626); subclass B1 (403); subclass B2 (16); subclass B3 (104); class C (246); class D (268).

Last updated: November 20, 2024.

If you use BLDB please cite: Naas, T.; Oueslati, S.; Bonnin, R. A.; Dabos, M. L.; Zavala, A.; Dortet, L.; Retailleau, P.; Iorga, B. I., Beta-Lactamase DataBase (BLDB) – Structure and Function. J. Enzyme Inhib. Med. Chem. 2017, 32, 917-919.

The development of the BLDB database was funded in part by the JPIAMR transnational project DesInMBL, the Région Ile-de-France (DIM Malinf) and the Laboratory of Excellence in Research on Medication and Innovative Therapeutics (LERMIT).

Contact: contact@bldb.eu

Live statistics (since December 3rd, 2023)