Beta-Lactamase DataBase
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Beta-Lactamase DataBase

Structures

Ambler
class
Protein
name
PDB
code
Resolution
(Å)
Release
date
UniProt
code
PubMed
ID
DOI
PDB
Mutations
Ligands
Space
group
Unit cell parameters
Z
value
▲ ▼▲ ▼▲ ▼▲ ▼▲ ▼▲ ▼
B1BcII-11BC21.901998-10-14P04190 973081210.1021/BI980506Ipdb SO4 ZN P 31 2 167.630 67.630 178.380 ♦ 90.00 90.00 120.0012
B1BcII-11BMC2.501996-08-28P04190 7588620—pdb ZN C 1 2 153.790 61.980 69.970 ♦ 90.00 93.67 90.004
B1BcII-11BVT1.851998-09-23P04190 976189810.1107/S0907444997010627pdb BCT ZN C 1 2 153.000 61.350 69.450 ♦ 90.00 92.93 90.004
B1BcII-11DXK1.852000-08-25P04190 1093350810.1110/ps.9.7.1402pdbC168S BCT ZN C 1 2 152.790 61.250 69.280 ♦ 90.00 92.93 90.004
B1BcII-11MQO1.352004-05-18P04190 pdb CD CIT C 1 2 153.260 61.380 69.650 ♦ 90.00 93.24 90.004
B1BcII-12BC21.701999-04-20P04190 pdb CSD SO4 ZN P 31 2 167.320 67.320 177.900 ♦ 90.00 90.00 120.0012
B1BcII-12BFK2.002005-03-31P04190 1577991010.1021/BI047709TpdbR121C AZI GOL SO4 ZN P 31 2 167.311 67.311 178.010 ♦ 90.00 90.00 120.0012
B1BcII-12BFL1.802005-03-31P04190 1577991010.1021/BI047709TpdbR121C AZI GOL SO4 ZN P 31 2 167.535 67.535 178.712 ♦ 90.00 90.00 120.0012
B1BcII-12BFZ2.302005-03-31P04190 1577991010.1021/BI047709TpdbR121C AZI CSD CSO GOL SO4 ZN P 31 2 167.309 67.309 177.604 ♦ 90.00 90.00 120.006
B1BcII-12BG22.402005-03-31P04190 1577991010.1021/BI047709TpdbR121C CL GOL SO4 ZN P 31 2 167.300 67.300 177.183 ♦ 90.00 90.00 120.0012
B1BcII-12BG62.302005-03-31P04190 1577991010.1021/BI047709TpdbR121C AZI CSD GOL SO4 ZN P 31 2 167.866 67.866 178.470 ♦ 90.00 90.00 120.0012
B1BcII-12BG72.102005-03-31P04190 1577991010.1021/BI047709TpdbR121C CSO GOL SO4 ZN P 31 2 167.578 67.578 178.769 ♦ 90.00 90.00 120.0012
B1BcII-12BG82.502005-03-31P04190 1577991010.1021/BI047709TpdbR121C CSO GOL SO4 ZN P 31 2 167.250 67.250 177.800 ♦ 90.00 90.00 120.006
B1BcII-12BGA2.702005-03-31P04190 1577991010.1021/BI047709TpdbR121C AZI CSD GOL SO4 ZN P 31 2 167.391 67.391 178.530 ♦ 90.00 90.00 120.0012
B1BcII-12M5C0.002013-10-09P04190 2405943510.1042/BJ20131003pdb ZN P 11.000 1.000 1.000 ♦ 90.00 90.00 90.001
B1BcII-12M5D0.002013-10-09P04190 2405943510.1042/BJ20131003pdb #RTD ZN P 11.000 1.000 1.000 ♦ 90.00 90.00 90.001
B1BcII-12NXA2.292007-05-22P04190 1791524910.1016/J.JMB.2007.08.031pdbC168D R91H ZN C 1 2 152.471 61.008 68.674 ♦ 90.00 92.85 90.004
B1BcII-12NYP1.842007-05-22P04190 1791524910.1016/J.JMB.2007.08.031pdbC168D R91H ZN C 1 2 152.464 61.023 68.710 ♦ 90.00 92.92 90.004
B1BcII-12NZE1.802007-05-29P04190 1791524910.1016/J.JMB.2007.08.031pdbR91H C168S ACY GOL SO4 ZN P 31 2 166.665 66.665 175.947 ♦ 90.00 90.00 120.0012
B1BcII-12NZF2.282007-05-29P04190 1791524910.1016/J.JMB.2007.08.031pdbR91H C168S ZN C 1 2 152.587 61.156 68.634 ♦ 90.00 93.11 90.004
B1BcII-12UYX1.952007-05-08P04190 1742602810.1074/JBC.M700742200pdbD120S GOL ZN C 1 2 153.389 61.970 69.573 ♦ 90.00 93.28 90.004
B1BcII-13BC21.701999-04-20P04190 pdb CSD ZN C 1 2 153.440 61.600 69.830 ♦ 90.00 93.27 90.004
B1BcII-13FCZ2.802008-12-09P04190 1909809610.1073/PNAS.0807989106pdbV112A L250S G262S N70S ZN P 1 21 169.670 48.810 77.190 ♦ 90.00 109.86 90.004
B1BcII-13I0V1.602009-12-29P04190 2067775310.1021/BI100894Rpdb OCS C 1 2 153.039 61.627 69.528 ♦ 90.00 92.98 90.004
B1BcII-13I111.452009-12-29P04190 2067775310.1021/BI100894Rpdb CO C 1 2 153.087 61.363 69.570 ♦ 90.00 93.00 90.004
B1BcII-13I131.742009-12-29P04190 2067775310.1021/BI100894Rpdb ZN C 1 2 153.111 61.410 69.483 ♦ 90.00 93.06 90.004
B1BcII-13I141.552009-12-29P04190 2067775310.1021/BI100894Rpdb CO GOL OCS C 1 2 153.078 61.699 69.630 ♦ 90.00 93.09 90.004
B1BcII-13I151.552009-12-29P04190 2067775310.1021/BI100894Rpdb CO OCS C 1 2 153.188 61.822 69.521 ♦ 90.00 93.24 90.004
B1BcII-13KNR1.712010-11-24P04190 2272914810.1038/NCHEMBIO.1005pdbC168D ACY GOL SO4 ZN P 1 21 180.143 94.364 79.898 ♦ 90.00 120.11 90.008
B1BcII-13KNS1.582010-11-24P04190 2272914810.1038/NCHEMBIO.1005pdbC168D ACY GOL SO4 ZN P 1 21 179.784 94.341 79.776 ♦ 90.00 119.62 90.008
B1BcII-14C091.202014-08-20P04190 pdb GOL SO4 ZN C 1 2 153.300 61.970 69.460 ♦ 90.00 93.04 90.004
B1BcII-14C1C1.182014-08-27P04190 pdb #MCO GOL SO4 ZN C 1 2 153.160 61.530 69.520 ♦ 90.00 92.98 90.004
B1BcII-14C1H1.102014-08-27P04190 pdb #X8Z GOL SO4 ZN C 1 2 153.009 61.336 69.580 ♦ 90.00 93.03 90.004
B1BcII-14NQ41.672014-11-26P04190 pdb K ZN C 1 2 153.115 60.810 69.251 ♦ 90.00 93.00 90.004
B1BcII-14NQ52.292014-11-26P04190 pdb #3C7 K ZN C 1 2 153.172 60.828 69.410 ♦ 90.00 93.01 90.004
B1BcII-14NQ61.802014-11-26P04190 pdb #3R9 K ZN C 1 2 153.084 61.276 69.506 ♦ 90.00 93.04 90.004
B1BcII-14NQ72.252014-11-26P04190 pdb #VC2 K ZN C 1 2 153.603 60.419 69.513 ♦ 90.00 93.28 90.004
B1BcII-14TYT1.802014-11-26P04190 2541188710.1038/NCHEM.2110pdb #S3C GOL SO4 ZN C 1 2 153.079 61.358 69.416 ♦ 90.00 93.00 90.004
B1BcII-15FQA1.102016-08-10P04190 pdb CSD EDO FE GOL OH SO4 C 1 2 153.048 61.500 69.469 ♦ 90.00 92.98 90.004
B1BcII-15FQB1.902016-08-10P04190 2749942410.1038/NCOMMS12406pdb #OK3 GOL SO4 ZN C 1 2 153.147 61.117 69.390 ♦ 90.00 93.12 90.004
B1BcII-15JMX1.442017-05-24P04190 pdb #DZ5 GOL SO4 ZN C 1 2 153.250 61.240 69.050 ♦ 90.00 93.09 90.004
B1BcII-15W8W2.252017-07-12P04190 pdb SO4 UNX ZN C 1 2 153.603 60.419 69.513 ♦ 90.00 93.28 90.004
B1BcII-16EUM1.182018-10-03P04190 2965560910.1016/J.BMC.2018.02.043pdb #BY5 CSO GOL SO4 ZN C 1 2 153.180 61.440 70.180 ♦ 90.00 93.20 90.004
B1BcII-16EWE1.462018-10-03P04190 2965560910.1016/J.BMC.2018.02.043pdb #C0W GOL SO4 ZN C 1 2 153.190 61.010 69.540 ♦ 90.00 92.99 90.004
B1BcII-16F2N1.152018-10-03P04190 2965560910.1016/J.BMC.2018.02.043pdb #CF8 SO4 ZN C 1 2 153.169 61.668 69.675 ♦ 90.00 93.13 90.004
Legend for ligands: * Ligand covalently-bound to active site residues; $ Non-covalent ligand (Michaelis complex); # Ligand coordinated to active site metal ions.

Statistics (number of structures): Overall (1663); class A (626); subclass B1 (403); subclass B2 (16); subclass B3 (104); class C (246); class D (268).

Last updated: November 20, 2024.

If you use BLDB please cite: Naas, T.; Oueslati, S.; Bonnin, R. A.; Dabos, M. L.; Zavala, A.; Dortet, L.; Retailleau, P.; Iorga, B. I., Beta-Lactamase DataBase (BLDB) – Structure and Function. J. Enzyme Inhib. Med. Chem. 2017, 32, 917-919.

The development of the BLDB database was funded in part by the JPIAMR transnational project DesInMBL, the Région Ile-de-France (DIM Malinf) and the Laboratory of Excellence in Research on Medication and Innovative Therapeutics (LERMIT).

Contact: contact@bldb.eu

Live statistics (since December 3rd, 2023)